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HTSJDK » 2.9.1

A Java API for high-throughput sequencing data (HTS) formats

Artifacts using htsjdk version 2.9.1 (18)
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1.Hadoop BAM26 usages

org.seqdoop » hadoop-bam MIT

A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.
Last Release on Apr 23, 2018

2.ADAM_2.12: Core22 usages

org.bdgenomics.adam » adam-core-spark2 Apache

ADAM_2.12: Core
Last Release on Dec 16, 2020

3.ADAM_2.11: Core12 usages

org.bdgenomics.adam » adam-core Apache

ADAM_2.11: Core
Last Release on Jan 4, 2018

Relocated → org.bdgenomics.adam » adam-core-spark2

4.LOCI5 usages

org.hammerlab.genomics » loci Apache

loci
Last Release on Jun 16, 2018

5.Big Data Genomics: Convert4 usages

org.bdgenomics.convert » convert Apache

Conversions to and from Big Data Genomics Avro Formats
Last Release on May 19, 2022

6.Load3 usages

org.hammerlab.bam » load Apache

load
Last Release on Dec 4, 2017

7.Check3 usages

org.hammerlab.bam » check Apache

check
Last Release on Dec 4, 2017

8.Utilities3 usages

org.hammerlab.genomics » utils Apache

utils
Last Release on Jun 16, 2018

9.Hadoop BAM3 usages

org.hammerlab » hadoop-bam MIT

A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.
Last Release on Aug 6, 2017

10.Big Data Genomics: Convert HTSJDK2 usages

org.bdgenomics.convert » convert-htsjdk Apache

Conversions between HTSJDK and Big Data Genomics Avro Formats
Last Release on May 19, 2022