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HTSJDK » 2.16.0

A Java API for high-throughput sequencing data (HTS) formats

Artifacts using htsjdk version 2.16.0 (7)
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1.NGS Utilities37 usages

com.github.biopet » ngs-utils MIT

ngs-utils
Last Release on Oct 25, 2018

2.Biodata Models25 usages

org.opencb.biodata » biodata-models Apache

Biological entities and their equivalents in different file formats typically used in bioinformatics
Last Release on Feb 24, 2026

3.Biodata Formats19 usages

org.opencb.biodata » biodata-formats Apache

Biological entities and their equivalents in different file formats typically used in bioinformatics
Last Release on Feb 24, 2026

4.Picard18 usages

com.github.broadinstitute » picard MIT

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Last Release on Apr 13, 2025

5.Biodata Tools14 usages

org.opencb.biodata » biodata-tools Apache

Biological entities and their equivalents in different file formats typically used in bioinformatics
Last Release on Feb 24, 2026

6.GATK43 usages

org.broadinstitute » gatk Apache

Development on GATK 4
Last Release on Apr 15, 2025

7.Score Client1 usages

bio.overture » score-client

score-client
Last Release on Jul 4, 2024
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