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A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

LicenseMIT
Tagsgithub
Used By6 artifacts

VersionRepositoryUsagesDate
2.18.x
2.18.20Central 0 Dec, 2018
2.18.19Central 0 Dec, 2018
2.18.18Central 0 Dec, 2018
2.18.17Central 0 Nov, 2018
2.18.16Central1Nov, 2018
2.18.15Central 0 Sep, 2018
2.18.14Central 0 Sep, 2018
2.18.13Central2Sep, 2018
2.18.12Central 0 Aug, 2018
2.18.11Central 0 Jul, 2018
2.18.10Central 0 Jul, 2018
2.18.9Central 0 Jul, 2018
2.18.8Central 0 Jul, 2018
2.18.7Central1Jun, 2018
2.18.6Central 0 Jun, 2018
2.18.5Central 0 May, 2018
2.18.4Central 0 Apr, 2018
2.18.3Central 0 Apr, 2018
2.18.2Central1Apr, 2018
2.18.1Central 0 Mar, 2018
2.18.0Central 0 Mar, 2018
2.17.x
2.17.11Central 0 Feb, 2018
2.17.10Central 0 Feb, 2018
2.17.9Central 0 Feb, 2018
2.17.8Central 0 Feb, 2018
2.17.7Central 0 Feb, 2018
2.17.6Central 0 Jan, 2018
2.17.5Central 0 Jan, 2018
2.17.4Central 0 Jan, 2018
2.17.3Central 0 Jan, 2018
2.17.2Central1Jan, 2018
2.17.1Central 0 Jan, 2018
2.17.0Central 0 Dec, 2017
2.16.x
2.16.0Central 0 Dec, 2017
2.15.x
2.15.0Central 0 Nov, 2017
2.14.x
2.14.1Central1Nov, 2017
2.14.0Central 0 Oct, 2017
2.14Central 0 Oct, 2017
2.13.x
2.13.2Central 0 Oct, 2017
2.13.1Central 0 Oct, 2017
2.13Central 0 Oct, 2017
2.12.x
2.12.2Central 0 Sep, 2017
2.12.1Central 0 Sep, 2017
2.12.0Central 0 Sep, 2017
2.11.x
2.11.0Central1Aug, 2017
2.10.x
2.10.10Central 0 Aug, 2017
2.10.9Central 0 Aug, 2017
2.10.8Central 0 Aug, 2017
2.10.7Central 0 Aug, 2017
2.10.6Central 0 Jul, 2017
2.10.5Central 0 Jul, 2017
2.10.4Central 0 Jul, 2017
2.10.3Central 0 Jul, 2017
2.10.2Central 0 Jul, 2017
2.10.1Central 0 Jul, 2017
2.10.0Central 0 Jul, 2017
2.9.x
2.9.5Central 0 Jul, 2017
2.9.4Central 0 Jun, 2017
2.9.3Central 0 Jun, 2017
2.9.2Central 0 May, 2017
2.9.1Central 0 May, 2017
2.9.0Central 0 Feb, 2017
2.8.x
2.8.3Central 0 Feb, 2017
2.8.2Central 0 Jan, 2017
2.8.1Central1Dec, 2016
2.8.0Central 0 Dec, 2016
2.7.x
2.7.2Central 0 Dec, 2016
2.7.1Central 0 Oct, 2016
2.7.0Central 0 Oct, 2016
2.6.x
2.6.0Central1Aug, 2016
2.5.x
2.5.0Central 0 Jun, 2016
2.4.x
2.4.1Central 0 May, 2016
2.3.x
2.3.0Central 0 May, 2016
2.2.x
2.2.4Central 0 Apr, 2016
2.2.3Central 0 Apr, 2016
2.2.2Central 0 Apr, 2016
2.2.1Central 0 Apr, 2016
2.2.0Central 0 Apr, 2016
2.1.x
2.1.1Central 0 Mar, 2016
2.1.0Central1Feb, 2016
2.0.x
2.0.1Central 0 Dec, 2015
2.0.0Central 0 Dec, 2015
1.143.x
1.143Central 0 Dec, 2015
1.142.x
1.142Central 0 Dec, 2015
1.141.x
1.141Central 0 Nov, 2015
1.140.x
1.140Central1Oct, 2015
1.139.x
1.139Central 0 Sep, 2015
1.138.x
1.138Central 0 Aug, 2015
1.137.x
1.137Central 0 Jul, 2015
1.136.x
1.136Central 0 Jul, 2015
1.135.x
1.135Central 0 Jun, 2015
1.134.x
1.134Central 0 Jun, 2015
1.133.x
1.133Central 0 Jun, 2015
1.131.x
1.131Central 0 May, 2015
1.130.x
1.130Central 0 Mar, 2015
1.129.x
1.129Central 0 Mar, 2015