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HTSJDK » 2.22.0

A Java API for high-throughput sequencing data (HTS) formats

Artifacts using htsjdk version 2.22.0 (6)
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1.Picard19 usages

com.github.broadinstitute » picard MIT

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Last Release on Aug 1, 2026

2.Gorpipe5 usages

org.gorpipe » gor-model AGPL

GORpipe allows analysis of large sets of genomic and phenotypic tabular data using a declarative query language in a parallel execution engine
Last Release on Nov 1, 2022

3.Disq4 usages

org.disq-bio » disq MIT

A library for manipulating bioinformatics sequencing formats in Apache Spark.
Last Release on May 3, 2021

4.GATK43 usages

org.broadinstitute » gatk Apache

Development on GATK 4
Last Release on Aug 19, 2026

5.Sequila

org.biodatageeks » sequila Apache +1

sequila
Last Release on Jul 26, 2024

6.GATK4 Test Utilities

org.broadinstitute » gatk-test-utils Apache

Development on GATK 4
Last Release on Aug 19, 2026
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