Group: Charite Compbio
1. Jannovar Core8 usages
de.charite.compbio » jannovar-coreBSD
jannovar-core is a library for the functional annotation of genomic variants
Last Release on Sep 13, 2022
2. Ontologizer Core Library7 usages
de.charite.compbio » ontologizer-core
Ontologizer Core Library
Last Release on Jan 19, 2018
3. Jannovar HTSJDK3 usages
de.charite.compbio » jannovar-htsjdkBSD
jannovar-htsjdk is the module for bridging between Jannovar and HTSJDK
Last Release on Sep 13, 2022
4. Ontologizer Benchmarking JAR2 usages
de.charite.compbio » ontologizer-benchmark
Ontologizer Benchmarking JAR
Last Release on Jan 19, 2018
5. Jannovar HGVS2 usages
de.charite.compbio » jannovar-hgvsBSD
parsing and representing HGVS annotations
Last Release on Sep 13, 2022
6. Ontologizer Singular Value Decomposition Extension1 usages
de.charite.compbio » ontologizer-svd
Ontologizer Singular Value Decomposition Extension
Last Release on Jan 19, 2018
8. Jannovar Vardbs
de.charite.compbio » jannovar-vardbsBSD
jannovar-vardbs helps with using variant annotation databases, e.g. dbSNP
Last Release on Sep 13, 2022
10. Ontologizer Command Line Standalone Bundle
de.charite.compbio » ontologizer-cmdline
Ontologizer Command Line Standalone Bundle
Last Release on Jan 19, 2018
11. Ontologizer Tests
de.charite.compbio » ontologizer-tests
Ontologizer Tests
Last Release on Jan 19, 2018
12. Ontologizer Parent Project
de.charite.compbio » ontologizer-parent
Ontologizer Parent Project
Last Release on Jan 19, 2018
14. Ontologizer GUI
de.charite.compbio » ontologizer-gui
Ontologizer GUI
Last Release on Jan 19, 2018
15. Jannovar Stats
de.charite.compbio » jannovar-statsBSD
jannovar-stats helps in aggregating statistics about variants and variant annotations
Last Release on Sep 13, 2022
16. Jannovar CLI
de.charite.compbio » jannovar-cliBSD
jannovar-cli is the command line interface for Jannovar
Last Release on Sep 13, 2022
17. Jannovar Filter
de.charite.compbio » jannovar-filterBSD
jannovar-filter helps with applying threshold-based filters for WES/WGS filters
Last Release on Sep 13, 2022
18. HyperSMURF
de.charite.compbio » hyperSMURFGPL
Weka implementation of hyperSMURF using EasyEnsemble and SMOTE
Last Release on Jun 12, 2017
19. Jannovar Inheritance Checker
de.charite.compbio » jannovar-inheritance-checkerBSD
jannovar-inheritance-checker is a library to filter variantContext with inheritances
Last Release on Dec 19, 2016