Group: Eurekaclinical

A library of classes shared across the Eureka! Clinical platform.

Protempa Framework is the core of Protempa.

JavaUtil is a utility library to speed the development of Java software. We developed it over multiple years during our internal development efforts, and it has reached a point of stability where we have decided to make it available to the outside world. The JavaUtil package aims to fill in the gaps of the Apache Commons and similar utility libraries out there. Features include convenience classes for string, collections, arrays, dates, ...

A library of classes shared across the Eureka! Clinical platform.

Implements support for retrieving data from relational databases.

Client for accessing Eureka!'s web services.

Protempa Ini4j INI Backend Configurations implements an INI configuration mechanism for Protempa.

Client for the User Agreement components.

Eureka! Clinical User Client is a library of shared client obejcts for the other modules of the Eureka! Clinical User project.

Eureka! Clinical Protempa Client

This code library updates and adds OAuth providers to the base ScribeUP library, available from https://github.com/PeterKnego/scribe-up.

Eureka! Clinical Registry Client

Eureka Common is a library of shared functionality for the other modules of the Eureka! Clinical Analytics project.

AIW i2b2 ETL is a Protempa query results handler for loading data and abstractions into i2b2.

Provides support for implementing Protempa backends using the Java ServiceLoader mechanism.

Ontology liquibase files.

Implements support for using the UMLS for access to clinical terms.

Eureka Protempa ETL is the backend data processing layer of Eureka! Clinical Analytics. It performs clinical phenotyping using the Protempa software framework. It currently loads data and found phenotypes into an i2b2 project, though ultimately it will support other export formats.

Provides support for implementing Protempa configuration backends using the Java ServiceLoader mechanism.

Client for the Patient Set components.