A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
License | MIT |
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Tags | github |
HomePage | http://broadinstitute.github.io/picard/ |
Date | Feb 18, 2020 |
Files | pom (2 KB) jar (1.6 MB) View All |
Repositories | CentralXillio |
Ranking | #21881 in MvnRepository (See Top Artifacts) |
Used By | 18 artifacts |
Vulnerabilities | Vulnerabilities from dependencies: CVE-2023-2976 CVE-2022-4065 CVE-2022-21126 View 2 more ... |
Compile Dependencies (7)
Category/License | Group / Artifact | Version | Updates | |
---|---|---|---|---|
MIT | com.github.samtools » htsjdk1 vulnerability | 2.21.0 | 4.1.0 | |
Core Utils Apache 2.0 | com.google.guava » guava3 vulnerabilities | 15.0 | 33.2.0-jre | |
Apache 2.0BSD 3-clauseMIT | com.intel.gkl » gkl | 0.8.5 | 0.8.11 | |
Core Utils Apache 2.0 | commons-lang » commons-lang | 2.6 | 3.14.0 | |
Math Lib Apache 2.0 | org.apache.commons » commons-math3 | 3.5 | 3.6.1 | |
Collections Apache 2.0 | org.apache.commons » commons-collections4 | 4.3 | 4.4 | |
BSD 3-clause | org.broadinstitute » barclay | 2.0.0 | 5.0.0 |
Test Dependencies (2)
Category/License | Group / Artifact | Version | Updates | |
---|---|---|---|---|
Core Utils Apache 2.0 | org.apache.commons » commons-lang3 | 3.6 | 3.14.0 | |
Testing Apache 2.0 | org.testng » testng1 vulnerability | 6.14.3 | 7.10.2 |
Licenses
License | URL |
---|---|
MIT License | http://opensource.org/licenses/MIT |
Developers
Name | Dev Id | Roles | Organization | |
---|---|---|---|---|
Picard Team | picard |