zarr-java is a Java library providing an implementation of chunked,
compressed, N-dimensional arrays close to the zarr-python package.
Artifacts using Zarr Java (8)
dev.zarr:zarr-java backed reader implementing the ome-zarr-imglib2
PyramidBackend (Zarr v2/v3).
Last Release on Sep 1, 2026
Bioformats2raw
Last Release on Jun 30, 2026
dev.zarr:zarr-java backed reader implementing the ome-zarr-imglib2
PyramidBackend (Zarr v2/v3).
Last Release on Sep 11, 2026
Opens OME-Zarr datasets in ImageJ and BigDataViewer (PyramidalDataset /
PyramidalBdv) without UI sugar. Backend-agnostic: requires an ome-zarr-n5 or
ome-zarr-zarrjava backend at runtime.
Last Release on Sep 1, 2026
MCP server giving LLM agents access to microscopy image data via Bio-Formats
Last Release on Jun 14, 2026
7.Zarr Spark
io.github.antoinegaston » zarr-spark Apache
Spark DataSource V2 connector for reading Zarr arrays with chunk-aligned partitioning and filter pushdown
Last Release on Mar 5, 2026
High-performance streaming OME-Zarr (OME-NGFF v0.5 / Zarr v3) writer and
reader with multiscale pyramid support and concurrent read-while-write. Modeled on
NDTiffStorage; no dependency on Micro-Manager.
Last Release on Jul 20, 2026
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