SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

ImageJ2 is a rewrite of ImageJ for multidimensional image data, with a focus on scientific imaging.

SCIFIO is a library for scientific N-dimensional image I/O.

ImageJ Operations: a framework for reusable algorithms.

Configurable key and mouse event handling

SciJava user interface components for Java Swing.

JSR-223-compliant Groovy scripting language plugin.

SCIFIO support for the OME data model, including OME-XML and OME-TIFF.

A tool for manual pointwise deformable registration using bigdataviewer.

Server- and client-side communication between ImageJ and OMERO.

Fiji plugin for the annotation of massive, multi-view data.