SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

I/O interfaces for ImgLib2 labelings.

BigDataViewer backend for N5, Zarr, etc.

These ImageJ plugins wrap ilastik workflows

ImageJ/OpenCVA integration

Submitting and monitoring ImageJ jobs on a computer cluster

JavaFX GUI for processing single-molecule TIRF and FMT data in the Structure and Dynamics of Molecular Machines research group.

Mars kymograph builder.

Fluorescence lifetime analysis in ImageJ.

The Domain Presentation Layer (DPL) of BoneJ2, i.e. the commands that wrap the needed ops, and present results for skeletal biologists.

New Era Painting and annotation tool