
SciJava user interface components for Java Swing.

Script Editor and Interpreter for SciJava script languages.
Last Release on Nov 13, 2025

Scenery-backed 3D visualization package for ImageJ.
Last Release on Jul 13, 2023

Big data viewer tools BIOP - EPFL
Last Release on Feb 26, 2025

Molecule Archive Suite (Mars) - core data storage and processing algorithms.
Last Release on Oct 22, 2025

Wrappers for ImageJ: Elastix, Transformix, Ilastik (add next here).
Last Release on Feb 26, 2025

Basic tracking algorithms based on Mastodon data structures.
Last Release on Jan 26, 2025

Scenery-backed 3D visualization package for ImageJ.
Last Release on Jul 26, 2024

This is the bioimage.io modelzoo library for ImageJ.
Last Release on Sep 9, 2021

Trainable segmentation features implemented with imglib2.
Last Release on Jun 25, 2021

Collection of tools to register images to atlases in Fiji.
Last Release on Feb 28, 2025