Core libraries shared among other modules

Compile Dependencies (41)

Category/LicenseGroup / ArtifactVersionUpdates
Apache 2.0
batik » batik
XML Graphics Batik
SVG Libraries Apache 2.0
batik » batik-rasterizer
Batik SVG Rasterizer Application
JSON Lib Apache 2.0
com.fasterxml.jackson.core » jackson-core
Core Jackson processing abstractions (aka Streaming API), implementation for JSON
JSON Lib Apache 2.0
com.fasterxml.jackson.core » jackson-databind
General data-binding functionality for Jackson: works on core streaming API
Data Format Apache 2.0
com.fasterxml.jackson.dataformat » jackson-dataformat-yaml
Support for reading and writing YAML-encoded data via Jackson abstractions.
com.github.cBioPortal.cbioportal » persistence-connections3.6.13
AGPL 3.0
com.github.cBioPortal.cbioportal » security-spring
cBioPortal for Cancer Genomics
3.6.13✔
AGPL 3.0
com.github.cBioPortal.cbioportal » service
cBioPortal for Cancer Genomics
3.6.135.4.10
com.github.cBioPortal.cbioportal » web3.6.135.4.6
JSON Lib Apache 2.0
com.googlecode.json-simple » json-simple
A simple Java toolkit for JSON
Apache 2.0
com.vlkan.hrrs » hrrs-servlet-filter-base64
CLI Parser Apache 2.0
commons-cli » commons-cli
Apache Commons CLI provides a simple API for presenting, processing, and validating a Command Line Interface.
Base64 Apache 2.0
commons-codec » commons-codec
The Apache Commons Codec component contains encoders and decoders for
Upload Manager Apache 2.0
commons-fileupload » commons-fileupload
The Apache Commons FileUpload Javax component provides a simple yet flexible means of adding support for multipart
HTTP Clients Apache 2.0
commons-httpclient » commons-httpclient
HTTPClient provides an efficient, up-to-date, and feature-rich package implementing the client side of the most recent ...
I/O Apache 2.0
commons-io » commons-io
The Apache Commons IO library contains utility classes, stream implementations, file filters,
XML Processing BSD 3-clause
dom4j » dom4j
flexible XML framework for Java
Java Spec EPL 2.0 +1
javax.servlet » javax.servlet-api
API for Jakarta Servlet, enabling web applications to handle HTTP requests and responses through a standard interface ...
XPath BSD 2-clause
jaxen » jaxen
Jaxen is a universal XPath engine for Java.
Testing EPL 2.0
junit » junit
JUnit Jupiter is the API for writing tests using JUnit 5.
Logging Apache 2.0
log4j » apache-log4j-extras
This package provides additional appenders, filters and
net.sf.jopt-simple » jopt-simple
A Java library for parsing command line options
BSD
net.sf.jung » jung-api
Graph interfaces used by the JUNG project
BSD
net.sf.jung » jung-graph-impl
Graph implementations for the JUNG project
CSV Apache 2.0
net.sf.opencsv » opencsv
A simple library for reading and writing CSV in Java
Parser Generator BSD 3-clause
org.antlr » antlr-runtime
The ANTLR 4 Runtime
Collections Apache 2.0
org.apache.commons » commons-collections4
The Apache Commons Collections package contains types that extend and augment the Java Collections Framework.
JDBC Pool Apache 2.0
org.apache.commons » commons-dbcp2
Apache Commons DBCP software implements Database Connection Pooling
String Utils Apache 2.0
org.apache.commons » commons-text
The Commons Text library provides additions to the standard JDK text handling. It includes algorithms for string ...
Apache 2.0
org.apache.geronimo.bundles » commons-discovery
This bundle simply wraps commons-discovery-0.4.jar.
HTTP Clients Apache 2.0
org.apache.httpcomponents » httpcore
Apache HttpComponents HTTP/1.1 core components
Apache 2.0
org.apache.xmlgraphics » batik-codec
Batik image codecs
Apache 2.0
org.apache.xmlgraphics » fop
XML Graphics Format Object Processor All-In-One
LGPL 2.1
org.biojava » biojava-core
LGPL 2.1
org.biojava » biojava-structure
The protein structure modules of BioJava.
Mocking Apache 2.0
org.easymock » easymock
EasyMock provides an easy way to create Mock Objects for interfaces and classes generating them on the fly
Mocking MIT
org.mockito » mockito-core
Mockito mock objects library core API and implementation
BSD 3-clause
org.owasp » antisamy
A library for performing fast, configurable cleansing of HTML coming from untrusted sources.
Transactions Apache 2.0
org.springframework » spring-tx
Support for programmatic and declarative transaction management for classes that implement special interfaces or any ...
Testing Apache 2.0
org.springframework » spring-test
Spring Test supports the unit testing and integration testing of Spring components with JUnit or TestNG. It provides ...
XML Processing Apache 2.0
xerces » xercesImpl
Xerces2 provides high performance, fully compliant XML parsers in the Apache Xerces family. This new version of Xerces ...

Test Dependencies (1)

Category/LicenseGroup / ArtifactVersionUpdates
AGPL 3.0
com.github.cBioPortal.cbioportal » db-scripts
cBioPortal for Cancer Genomics
3.6.135.4.10