Common Java files for Google Genomics integrations with GATK/Picard/HTSJDK
Compile Dependencies (13)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
CLI Parser
Apache 2.0
|  | com.beust
»
jcommander Command line parsing library for Java | 1.35 | 3.0 |
MIT
|  | com.github.samtools
»
htsjdk1 vulnerability A Java API for high-throughput sequencing data (HTS) formats | 1.128 | 5.0.0 |
Apache 2.0
|  | com.google.api-client
»
google-api-client Google client library for accessing Google APIs, providing OAuth2 support and request/response handling. | 1.19.0 | 2.9.1 |
Apache 2.0
| | com.google.apis » google-api-services-genomics | v1beta2-rev9-1.19.0 | v1-rev20210605-1.31.0 |
Apache 2.0
| | com.google.cloud.genomics
»
google-genomics-utils Common Java files for Google Genomics integrations. | v1beta2-0.19 | v1-0.10 |
Core Utils
Apache 2.0
| | com.google.guava
»
guava3 vulnerabilities Guava is a suite of core and expanded libraries that include | 18.0 | 33.7.1-jre |
HTTP Clients
Apache 2.0
| | com.google.http-client
»
google-http-client Google HTTP Client Library for Java. Functionality that works on all supported Java platforms, | 1.19.0 | 2.2.0 |
Apache 2.0
| | com.google.http-client » google-http-client-jackson2 | 1.19.0 | 2.2.0 |
OAuth Lib
Apache 2.0
| | com.google.oauth-client
»
google-oauth-client2 vulnerabilities Google OAuth Client Library for Java. Functionality that works on all supported Java platforms, | 1.19.0 | 1.39.0 |
Apache 2.0
| | com.google.oauth-client
»
google-oauth-client-jetty Runs an HTTP server on a free port, waiting for a | 1.19.0 | 1.39.0 |
OAuth Lib
Apache 2.0
| | com.google.oauth-client » google-oauth-client-java6 | 1.19.0 | 1.39.0 |
Apache 2.0
|  | gov.nist.math.jama » gov.nist.math.jama | 1.1.1 | ✔ |
Reflection
Apache 2.0
|  | org.reflections
»
reflections Reflections - Java runtime metadata analysis | 0.9.9 | 0.10.2 |
Runtime Dependencies (3)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
Java Spec
CDDL +2
|  | javax.servlet
»
servlet-api Java Servlet is the foundation web specification in the Java Enterprise Platform. Developers can build web applications ... | 2.5 | 4.0.1 |
Web Server
Apache 2.0 +1
|  | org.mortbay.jetty
»
jetty Jetty Server Artifact | 6.1.26 | 12.1.12 |
Apache 2.0 +1
| | org.mortbay.jetty
»
jetty-util Jetty Utilities Artifact | 6.1.26 | 12.1.12 |
Test Dependencies (3)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
Testing
EPL 2.0
|  | junit
»
junit1 vulnerability JUnit Jupiter is the API for writing tests using JUnit 5. | 4.11 | 6.1.3 |
Testing
BSD 3-clause
|  | org.hamcrest
»
hamcrest-all Core API and libraries of hamcrest matcher framework. | 1.3 | 3.0 |
Mocking
MIT
|  | org.mockito
»
mockito-core Mockito mock objects library core API and implementation | 1.10.8 | 5.23.0 |