SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

ImageJ 3D Suite wrapper for CLIJx-assistant

Imglib2 wrapper for CLIJx-assistant

MorphoLibJ wrapper for CLIJx-assistant

SimpleITK wrapper for CLIJx-assistant

The Domain Presentation Layer (DPL) of BoneJ2, i.e. the commands that wrap the needed ops, and present results for skeletal biologists.

A collection of commands to interact with Imaris Converter

Fiji is a distribution of ImageJ for the life sciences.

Basic track analysis, plugged as TrackMate modules.

Basic track analysis, plugged as TrackMate modules.

Scenery-backed 3D visualization package for ImageJ.