Math functions for the Java 3D Graphics API

Utility methods for BoneJ2

VectorString component of TrakEM2 suite.

BACMMAN Core

Ops created for BoneJ2

Ops created for BoneJ2

The Volume Calculator plugin is designed to let users measure the volumes of arbitrary segments of blood vessels by selecting them directly from a 3D image. Although Volume Calculator was developed for quantification in a mouse hindlimb ischemia ...

ModularImageAnalysis (MIA) is an ImageJ plugin which provides a modular framework for assembling image and object analysis workflows. Detected objects can be transformed, filtered, measured and related.

The ImageJ framework for semi-automated tracing of neurons and other tube-like structures.

The Domain Presentation Layer (DPL) of BoneJ2, i.e. the commands that wrap the needed ops, and present results for skeletal biologists.

Mavenized version of the BoneJ1 plugins