The jmzReader library is a collection of parsers to process the most commonly used Mass Spectrometry text and xml based file formats using a single interface.
Compile Dependencies (0)
| Category/License | Group / Artifact | Version | Updates |
|---|
Managed Dependencies (57)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
Bytecode
Apache 2.0
|  | cglib
»
cglib High level API to generate and transform Java byte code. | 2.2.2 | 3.3.0 |
Logging
EPL 2.0 +1
|  | ch.qos.logback
»
logback-core9 vulnerabilities Core implementation of Logback, a reliable, generic, fast and flexible logging framework. | 1.0.7 | 1.6.6 |
Logging
EPL 2.0 +1
| | ch.qos.logback
»
logback-classic2 vulnerabilities Implementation of the SLF4J API for Logback, a reliable, generic, fast and flexible logging framework. | 1.0.7 | 1.6.6 |
JSON Lib
Apache 2.0
|  | com.fasterxml.jackson.core
»
jackson-databind53 vulnerabilities General data-binding functionality for Jackson: works on core streaming API | 2.5.2 | 3.2.4 |
Annotation Lib
Apache 2.0
| | com.fasterxml.jackson.core
»
jackson-annotations Core annotations used for value types, used by Jackson data binding package. | 2.5.2 | 2.22 |
JSON Lib
Apache 2.0
| | com.fasterxml.jackson.core
»
jackson-core3 vulnerabilities Core Jackson processing abstractions (aka Streaming API), implementation for JSON | 2.5.2 | 3.2.4 |
JSON Lib
Apache 2.0
|  | com.google.code.gson
»
gson1 vulnerability Gson is a Java library that can be used to convert Java Objects into their JSON representation. It can also be used to ... | 2.3.1 | 2.15.0 |
XML Processing
EDL 1.0
|  | com.sun.xml.bind
»
jaxb-xjc Old JAXB Binding Compiler. Contains source code needed for binding customization files into java sources. | 2.2.7 | 4.0.9 |
XML Processing
EDL 1.0
| | com.sun.xml.bind
»
jaxb-impl Old JAXB Runtime module. Contains sources required for runtime processing. | 2.2.7 | 4.0.9 |
CLI Parser
Apache 2.0
|  | commons-cli
»
commons-cli Apache Commons CLI provides a simple API for presenting, processing, and validating a Command Line Interface. | 1.2 | 1.11.0 |
Collections
Apache 2.0
|  | commons-collections
»
commons-collections(optional)2 vulnerabilities The Apache Commons Collections package contains types that extend and augment the Java Collections Framework. | 3.2.1 | 4.6.0 |
Config
Apache 2.0
|  | commons-configuration
»
commons-configuration1 vulnerability The Commons Configuration software library provides a generic configuration interface that enables an application to ... | 1.10 | 2.15.1 |
JDBC Pool
Apache 2.0
|  | commons-dbcp
»
commons-dbcp Apache Commons DBCP software implements Database Connection Pooling | 1.2.2 | 2.14.0 |
Upload Manager
Apache 2.0
|  | commons-fileupload
»
commons-fileupload7 vulnerabilities The Apache Commons FileUpload Javax component provides a simple yet flexible means of adding support for multipart | 1.2 | 2.0.0-M5 |
I/O
Apache 2.0
| | commons-io
»
commons-io1 vulnerability The Apache Commons IO library contains utility classes, stream implementations, file filters, | 1.3.2 | 2.22.0 |
Core Utils
Apache 2.0
| | commons-lang
»
commons-lang1 vulnerability Apache Commons Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are ... | 2.6 | 3.21.0 |
FTP
Apache 2.0
|  | commons-net
»
commons-net1 vulnerability Apache Commons Net library contains a collection of network utilities and protocol implementations. | 3.3 | 3.13.0 |
Collections
Apache 2.0
|  | it.unimi.dsi
»
fastutil fastutil extends the Java Collections Framework by providing type-specific maps, sets, lists, and queues with a small ... | 6.5.1 | 8.5.19 |
Java Spec
CDDL +2
|  | javax.servlet
»
servlet-api Java Servlet is the foundation web specification in the Java Enterprise Platform. Developers can build web applications ... | 2.5 | 4.0.1 |
Java Spec
CDDL +1
| | javax.servlet » jstl | 1.2 | ✔ |
Java Spec
CDDL +1
| | javax.servlet.jsp
»
jsp-api The official API for JavaServer Pages (JSP), enabling dynamic web page generation in Java EE. | 2.1 | 2.3.3 |
Java Spec
Apache 2.0
| | javax.validation
»
validation-api JavaBeans Validation (Bean Validation) is a validation model that can add constraints to the beans with annotations ... | 1.1.0.Final | 3.1.1 |
Testing
EPL 2.0
|  | junit
»
junit1 vulnerability JUnit Jupiter is the API for writing tests using JUnit 5. | 4.10 | 6.1.3 |
Core Utils
Apache 2.0
|  | org.apache.commons
»
commons-lang31 vulnerability Apache Commons Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are ... | 3.0 | 3.21.0 |
I/O
Apache 2.0
| | org.apache.commons
»
commons-io1 vulnerability The Apache Commons IO library contains utility classes, stream implementations, file filters, | 1.3.2 | 2.22.0 |
HTTP Clients
Apache 2.0
|  | org.apache.httpcomponents
»
httpclient1 vulnerability Apache HttpComponents Client | 4.5 | 5.6.5 |
JSP Tag Library
Apache 2.0
|  | org.apache.tiles
»
tiles-jsp Tiles JSP support: Classes and tag libraries to use Tiles in a | 2.2.2 | 3.0.8 |
AOP
EPL 2.0
|  | org.aspectj
»
aspectjrt The AspectJ runtime is a small library necessary to run Java programs enhanced by AspectJ aspects during a previous | 1.6.9 | 1.9.26 |
AOP
EPL 2.0
| | org.aspectj
»
aspectjweaver The AspectJ weaver applies aspects to Java classes. It can be used as a Java agent in order to apply load-time | 1.6.9 | 1.9.26 |
JSON Lib
Apache 2.0
|  | org.codehaus.jackson
»
jackson-mapper-asl2 vulnerabilities General data-binding functionality for Jackson: works on core streaming API | 1.9.9 | 2.22.4 |
XML Processing
Apache 2.0
| | org.codehaus.woodstox
»
woodstox-core-asl Woodstox is a high-performance XML processor that implements Stax (JSR-173), | 4.4.1 | 7.3.0 |
JSON Lib
Public
|  | org.json
»
json2 vulnerabilities JSON is a light-weight, language independent, data interchange format. | 20090211 | 20260814 |
Mocking
MIT
|  | org.mockito
»
mockito-core Mockito mock objects library core API and implementation | 1.9.5 | 5.24.0 |
Logging
MIT
|  | org.slf4j
»
slf4j-api API for SLF4J (The Simple Logging Facade for Java) which serves as a simple facade or abstraction for various logging ... | 1.6.4 | 2.0.20 |
Logging Bridge
Apache 2.0
| | org.slf4j
»
jcl-over-slf4j Jakarta/Apache commons logging 1.2 implemented over SLF4J | 1.6.4 | 2.0.20 |
Logging Bridge
MIT
| | org.slf4j
»
slf4j-log4j12 SLF4J Reload4j Provider | 1.7.12 | 2.0.20 |
Dep Injection
Apache 2.0
|  | org.springframework
»
spring-beans2 vulnerabilities Spring Beans provides the configuration framework and basic functionality to instantiate, configure, and assemble java ... | 4.2.2.RELEASE | 7.0.10 |
Dep Injection
Apache 2.0
| | org.springframework
»
spring-context3 vulnerabilities Spring Context provides access to configured objects like a registry (a context). It inherits its features from Spring ... | 4.2.2.RELEASE | 7.0.10 |
Core Utils
Apache 2.0
| | org.springframework
»
spring-core6 vulnerabilities Basic building block for Spring that in conjunction with Spring Beans provides dependency injection and IoC features. | 4.2.2.RELEASE | 7.0.10 |
JDBC Extension
Apache 2.0
| | org.springframework
»
spring-jdbc Spring JDBC provides an abstraction layer that simplifies code to use JDBC and the parsing of database-vendor specific ... | 4.2.2.RELEASE | 7.0.10 |
Transactions
Apache 2.0
| | org.springframework
»
spring-tx Support for programmatic and declarative transaction management for classes that implement special interfaces or any ... | 4.2.2.RELEASE | 7.0.10 |
Web Framework
Apache 2.0
| | org.springframework
»
spring-webmvc13 vulnerabilities Spring webmvc contains Spring's model-view-controller (MVC) and REST Web Services implementation for web applications. ... | 4.2.2.RELEASE | 7.0.10 |
Web Framework
Apache 2.0
| | org.springframework
»
spring-web6 vulnerabilities Spring Web provides integration features such as multipart file upload functionality and the initialization of the IoC ... | 4.2.2.RELEASE | 7.0.10 |
O/R Mapping
Apache 2.0
| | org.springframework
»
spring-orm Spring Object/Relational Mapping which provides integration layers for popular object-relational mapping APIs, including ... | 4.1.6.RELEASE | 7.0.10 |
Config
Apache 2.0
| | org.springframework
»
spring-context-support Support classes for integrating common third-party libraries into a Spring application context | 4.2.2.RELEASE | 7.0.10 |
AOP
Apache 2.0
| | org.springframework
»
spring-aop Spring AOP provides an Alliance-compliant aspect-oriented programming implementation allowing you to define method ... | 4.2.2.RELEASE | 7.0.10 |
Expression Lang
Apache 2.0
| | org.springframework
»
spring-expression8 vulnerabilities Powerful Expression Language for querying and manipulating an object graph at runtime. It is an extension of the ... | 4.2.2.RELEASE | 7.0.10 |
Testing
Apache 2.0
| | org.springframework
»
spring-test Spring Test supports the unit testing and integration testing of Spring components with JUnit or TestNG. It provides ... | 4.2.2.RELEASE | 7.0.10 |
Apache 2.0
|  | org.springframework.batch
»
spring-batch-core1 vulnerability Core domain for batch processing, expressing a domain of Jobs, Steps, Chunks, etc | 3.0.5.RELEASE | 6.0.6 |
Apache 2.0
| | org.springframework.batch
»
spring-batch-infrastructure The Spring Batch Infrastructure is a set of | 3.0.5.RELEASE | 6.0.6 |
Apache 2.0
| | org.springframework.batch
»
spring-batch-test Domain for batch job testing | 3.0.5.RELEASE | 6.0.6 |
MongoDB Client
Apache 2.0
|  | org.springframework.data
»
spring-data-mongodb3 vulnerabilities MongoDB support for Spring Data | 1.9.0.RELEASE | 5.1.2 |
Security
Apache 2.0
|  | org.springframework.security
»
spring-security-core8 vulnerabilities Spring Security is a powerful and highly customizable authentication and access-control framework. It provides ... | 3.2.4.RELEASE | 7.1.2 |
Config
Apache 2.0
| | org.springframework.security
»
spring-security-config Spring Security | 3.2.4.RELEASE | 7.1.2 |
Security
Apache 2.0
| | org.springframework.security
»
spring-security-web5 vulnerabilities Spring Security | 3.2.4.RELEASE | 7.1.2 |
JSP Tag Library
Apache 2.0
| | org.springframework.security
»
spring-security-taglibs Spring Security | 3.2.4.RELEASE | 7.1.2 |
Social Network Client
Apache 2.0
|  | org.springframework.social
»
spring-social-twitter Twitter API | 1.0.5.RELEASE | 1.1.2.RELEASE |