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HTSJDK

A Java API for high-throughput sequencing data (HTS) formats

Artifacts using HTSJDK (133)
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41.ADAM Core2 usages

org.hammerlab.adam » adam-core Apache

adam-core
Last Release on Nov 29, 2016

42.Big Data Genomics: Convert HTSJDK2 usages

org.bdgenomics.convert » convert-htsjdk Apache

Conversions between HTSJDK and Big Data Genomics Avro Formats
Last Release on May 19, 2022

43.HPG BigData Core2 usages

org.opencb.hpg-bigdata » hpg-bigdata-core Apache

HPG BigData Core
Last Release on Aug 31, 2016

44.TASSEL2 usages

net.maizegenetics » tassel LGPL

TASSEL is a software package to evaluate traits associations, evolutionary patterns, and linkage disequilibrium.
Last Release on Mar 31, 2025

45.Svart2 usages

org.monarchinitiative.svart » svart BSD

a library to ease representation of variants and performing genomic manipulations
Last Release on Nov 22, 2021

46.Snp Effect2 usages

com.databricks » SnpEff LGPL

Variant annotation and effect prediction package.
Last Release on Jul 26, 2018

47.HPG BigData Tools2 usages

org.opencb.hpg » hpg-bigdata-tools Apache

HPG BigData Tools
Last Release on Sep 18, 2015

48.Core Bundle Wrapper, Deployer2 usages

org.lorainelab.igb » shared-lib-wrapper

Core Bundle Wrapper, Deployer
Last Release on May 6, 2025

49.Core UCSC Rest API Module2 usages

org.lorainelab.igb » ucsc-rest-api-service

Core UCSC Rest API Module
Last Release on May 6, 2025

50.HPG BigData Core2 usages

org.opencb.hpg » hpg-bigdata-core Apache

HPG BigData Core
Last Release on Sep 18, 2015