SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

ImageJ2 is a rewrite of ImageJ for multidimensional image data, with a focus on scientific imaging.

SCIFIO is a library for scientific N-dimensional image I/O.

This library contains ImageJ's core image data model, based on ImgLib2. It is the primary mechanism by which image data is managed internally by ImageJ2.

ImageJ Operations: a framework for reusable algorithms.

Not HDF5

Script Editor and Interpreter for SciJava script languages.

Table structures for SciJava.

Deprecated ImageJ packages.

3D mesh structures for ImageJ.

clij-core