SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

A collection of ImageJ2 plugins wrapping several ImageJ commands to make them work headless e.g. in KNIME.

ImageJ plugins for processing VisiView datasets

A SciJava plugin to interact with Prefect Cloud, developed at the FMI Basel.

ImageJ utilities and commands for stitching various datasets

A collection of plugins developed at the FMI Basel.

This is a demo application for 3D cropping/segmentation of zebrafish hearts.

Volume rendering of bdv datasets

ELEPHANT client application implemented as a Mastodon plugin

Volume rendering of bdv datasets

Scenery-backed 3D visualization package for ImageJ.