SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

The framework for quantification of neuronal anatomy

JSR-223-compliant JavaScript scripting language plugin.

SCIFIO support for the OME data model, including OME-XML and OME-TIFF.

JSR-223-compliant Kotlin scripting language plugin.

Opens OME-Zarr datasets in ImageJ and BigDataViewer (PyramidalDataset / PyramidalBdv) without UI sugar. Backend-agnostic: requires an ome-zarr-n5 or ome-zarr-zarrjava backend at runtime.

Multiview stitching of large datasets.

dev.zarr:zarr-java backed reader implementing the ome-zarr-imglib2 PyramidBackend (Zarr v2/v3).

Fiji is a distribution of ImageJ for the life sciences.

IJ2 commands that use bio-formats to create pyramidal ome.tiff

ELEPHANT client application implemented as a Mastodon plugin