SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

TrackMate detector based on the watershed segmentation tool in the MorphoLibJ plugin.

ImageJ OPS: a framework for reusable algorithms.

Fluorescence lifetime analysis in ImageJ.

Submitting and monitoring ImageJ jobs on a computer cluster

Pluggable command-line tools for performing SCIFIO-based image IO operations.

Scijava/imglib2 images are pinged back and forth over a network...

incubator

ImageJ UI for Java AWT.

The Domain Presentation Layer (DPL) of BoneJ2, i.e. the commands that wrap the needed ops, and present results for skeletal biologists.

Cell Counter plugin for ImageJ.